Beat the Wrath of Khan
Go to the simulation option and select 'The Wrath of Khan'. There will be a message from the Space Lab. Then, go to Ship Status to choose Red alert and turn your Tactical display on. Warp to deep space to fight the USS RELIANT. Please note: the Reliant takes out your shields in 2 shots! Fire your phasers and photon torpedoes at the opponent until they signal you. Reply to the hail by choosing choice A:"Genesis, what's that?" Next, select B: "Khan, how do we know you'll keep your word?". Then, C, the opponant's prefix code:16309. After you've done that, the Reliant will warp out, stay behind and repair your shields. Navigate to where the Reliant warped to and start fighting. Hail the Reliant, Kirk will say, "Khan, you bloodsucker!..." In the middle of the message, it says that Khan beamed up the Genesis device. Begin fighting the Reliant until it spins out of control. Hail the ship! Move away from the damaged starship 'til your engineer says the Warp Power is back on-line! Then, set course for Ceti Alpha 5 and warp out.

Special Ending
At the Password Option screen, hold L + R + Select and press X, X, X, A, L, A, R, Y, A, R, A, A. Next press X, Y, X, Y, Y, A, B, A, B. Release all buttons, then press Select again. Return to the screen with the picture menus and choose Insignia. Choose "Ship" when he gives you an option. Hail the Kobayashi Maru by choosing choice A, and navigate toward 014,021. When the computer says the Klingons are about to attack, hail them!

Prototype Ship in Training Simulator
You need at least two controlers for this to work. First, enter the 2-Player Combat Training. Then do the extra ship code on controller 1. Player 1 must pick the Gorn Crusier and Player 2 must pick the Pheonix. Go into the simulator and have the Pheonix win. Finally, enter the 1-player Combat Simulator. The first ship that is avalible is the Federation Prototype. This is the ultimate ship. It can destroy almost anything in about two hits.

Play as the Excelsior
Enter the Extra ships code. Go to two-player mode and set Player One as the Gorn Cruiser and Player Two as the Romulan Phoenix. Fight the battle and let the Phoenix win. Return to combat training to access the Excelsior. If you change ships during the game you'll have to reenter this code.

Mission Passcodes

• Password / Mission
• X X X R X X Y R X R Y L / Mission 101
• X X X R A X A L X R Y Y / Mission 102
• X X X R L Y Y A X R Y X / Mission 103
• X X X R Y Y A X X R Y L / Mission 104
• X X X R B A X L X R Y A / Mission 105
• X X X R R X Y R X Y Y B / Mission 201
• X X X L X X A B X Y Y A / Mission 202
• X X X L A Y Y A X Y Y A / Mission 203
• X X X L L Y A X X Y Y X / Mission 204
• X X X L Y A X L X Y Y A / Mission 205
• X X X L B X Y R Y L X X / Mission 301
• X X X L R X Y R Y L X R / Mission 302
• X X X B X X A L Y L X B / Mission 303
• X X X B A Y Y A Y L X A / Mission 304
• X X X B L Y A X Y L X X / Mission 305
• X X X B Y X Y R Y Y B L / Mission 401
• X X X B B X A B Y Y B A / Mission 402
• X X X B R Y Y A Y Y B X / Mission 403
• X X X A X Y Y A Y Y B A / Mission 404
• X X X A A Y A Y Y Y B B / Mission 405
• X X X A L A X R Y Y B Y / Final Exam

These cheats are for the Sega 32X platform:

Mission Passwords

• Password / Level
• RUBUBLRRBU / Mission 1
• LUBUBRRRBA / Mission 2
• RUBUBSRRBA / Mission 3
• LUBUBCRRBU / Mission 4
• RUAUBDRDBU / Mission 5
• LUBUBRRLBA / Mission 6
• LUBUBCRLBU / Mission 7
• RUBUALRRBD / Mission 8
• UBSBLLLAAC / Mission 9
• LUAUAURUBB / Mission 10
• RUBUASRRBB / Mission 11
• LUBUACRRBD / Mission 12
• RUBUALRLBD / Mission 13
• LUBUARRLBB / Mission 14
• RUAUABRDBB / Mission 15
• LUBUACRLBD / Mission 16
• RUBUBLRRBD / Mission 17
• LUBUBRRRBB / Mission 18
• RUBUBSRRBB / Mission 19
• LUBUBCRRBD / Mission 20